Publications and Datasets


2009 Groeneveld, L.F., Weisrock, D.W., Rasoloarison, R., Yoder, A.D. and P.M. Kappeler. Species delimitation in lemurs: multiple genetic loci reveal low levels of species diversity in the genus Cheirogaleus. BMC Evolutionary Biology (in press).
2009 O’Brien, J., Mariani, C., Olson, L.E., Russell, A.L., Say, L., Yoder, A.D. and T.J. Hayden. Multiple colonizations of the Western Indian Ocean by Pteropus fruit bats (Megachiroptera: Pteropodidae): the furthest islands were colonized first. Mol. Phyl. & Evol. (in press).
2009 Karanth, K.P. and A.D. Yoder. Geographic origins of aDNA samples and prospects for aDNA studies in the tropics. In: Molecular Markers, PCR, Bioinformatics and Ancient DNA – Technology, Troubleshooting And Applications (G. Dorado, ed.) Science Publishers (in press).
2009 Noonan, B.P. and A.D. Yoder. Anonymous nuclear markers for Malagasy plated lizards (Zonosaurus). Molecular Ecology Resources, 9:402-404. pdf
2009 Raselimanana, A., Noonan, B.P., Karanth, P., Gauthier, J., and A.D. Yoder. Phylogeny and Evolution of Malagasy Plated Lizards. Mol. Phyl. & Evol. 50: 336-344. pdf
2008 Riddle, BR; Dawson, MN; Hadly, EA, Hafner, D.J., Hickerson MJ, Mantooth SJ, and A.D. Yoder. The role of molecular genetics in sculpting the future of integrative biogeography. Progress in Physical Geography, 32 (2): 173-202. pdf
2008 Horvath, J., Weisrock, D., Embry, S.L., Fiorentino, Balhoff, J.P., I., Kappeler, P., Wray, G.A., Willard, H., and A.D. Yoder. The development and application of a phylogenomic toolkit: resolving the evolutionary history of Madagascar’s lemurs. Genome Research 18(3): 489-499. pdf
2008 Russell, A.L., Goodman, S.M., Fiorentino, I., and A.D. Yoder. Population genetic analysis of Myzopoda spp. (Chiroptera: Myzopodidae) in Madagascar. J. Mamm. 89 (1): 209-221. pdf
2007 Yoder, A.D. Lemurs: a Quick Guide. Current Biology, 17 (20): 866-868. pdf
2007 Heckman, K.L., Hanley, C.L., Rasoloarison, R. and A.D. Yoder. Multiple nuclear loci reveal patterns of incomplete lineage sorting and complex species history within western mouse lemurs (Microcebus). Mol. Phyl. & Evol. 43 (2): 353-367. . pdf
2007 Naghibalhossaini, F., Yoder, A.D., Tobi, M., and C.P. Stanners. Evolution of a tumorigenic property conferred by Glycophosphatidyl-inositol membrane anchors of CEA gene family members during the primate radiation. Molecular Biology of the Cell 18 (4): 1366-1374). pdf
2007 Russell, A.L., Ranivo, J., Palkovacs, E.P., Goodman, S.M., and A.D. Yoder. Working at the interface of phylogenetics and population genetics: a biogeographic analysis of Triaenops spp (Chiroptera: Hipposideridae) Molecular Ecology, 16:839-851. pdf
2006 Heckman, K. L., Rasoazanabary, E., Machlin, E., Godfrey, L.R., and A. D. Yoder. Incongruence between genetic and morphological diversity in Microcebus griseorufus of Beza Mahafaly. BMC Evolutionary Biology, 6:98 (16 Nov 2006). pdf
2006 Yoder, A.D. and M. Nowak. Has vicariance or dispersal been the predominant biogeographic force in Madagascar?: only time will tell. Ann. Rev. Ecol. Evol. Syst., 37:405-431. pdf
2006 Goodman, S.M., Cardiff, S. G., Ranivo, J., Russell, A.L. and A.D. Yoder. A new species of Emballonura (Emballonuridae: Chiroptera) from the dry regions of Madagascar. American . Museum Novitates, No. 3538: 1-24. pdf
2006 Yoder, A.D. and K. Heckman. Mouse lemur phylogeography revises a model of ecogeographic constraint in Madagascar. In: Primate Biogeography: Progress and Prospects (J. Fleagle and S.M. Lehman, eds.) Kluwer Press, pp. 255 – 268. pdf
2005 Yoder, A.D. The biogeography of Madagascar: where to turn when the fossils aren’t there. Paleontological Society Papers, V. 11, 129-139.
2005 Tan, Y., Yoder, A.D., Yamashita, N. and W.-H. Li. Evidence from opsin genes rejects nocturnality in ancestral primates. Proceedings of the National Academy of Sciences 102: 14712-14716. pdf
2005 Yoder, A.D., Olson, L.E., Hanley, C., Heckman, K., Rasoloarison, R., Russell, A.L., Ranivo, J., Soarimalala, V., Karanth, K.P., Raselimanana, A.P. and S.M. Goodman. A multidimensional approach for detecting species patterns in Malagasy vertebrates. Proceedings of the National Academy of Sciences 102: 6587-6594, Suppl. 1 (invited Colloquium contribution). pdf
2005 Karanth, P. Rakotosamimanana, B., Parsons, T.J. and A.D. Yoder. Ancient DNA from giant extinct lemurs verifies single origin of Malagasy primates. Proceedings of the National Academy of Sciences 102: 5090-5095. pdf
2005 Karanth, K.P., Palkovacs, E., Gerlach, J., Glaberman, S., Caccone, A., and A.D. Yoder. Native Seychelles tortoises or Aldabran imports? The importance of radiocarbon dating for ancient DNA studies. Amphibia-Reptilia 26(1): 116-121. pdf
2004 Olson, L.E., Goodman, S., and A.D. Yoder. Illumination of cryptic species boundaries in long-tailed shrew tenrecs (Mammalia: Tenrecidae; Microgale) provides insights into geographic variation and distributional constraints. Biological Journal of the Linnean Society, 83:1-22. pdf
2004 Yoder, A.D. and Z. Yang. Divergence dates for Malagasy lemurs estimated from multiple gene loci: geological and evolutionary context. Molecular Ecology, 13:757-773. pdf
2004 Yoder, A.D. Review of A Primer of Conservation Genetics, by Frankahm, R., Ballou, J.D. and D.A. Briscoe. Journal of Mammalogy (info).
2003 Kunstman, K., Puffer, B., Korber, B., Kuiken, C., Smith, U., Kunstman, J., Stanton, J., Agy, M., Shibata, R., Yoder, A.D., Pillai, S., Doms, R., Marx, P., and S. Wolinsky. Structure and Function of CC-Chemokine Receptor 5 Homologues Derived from Representative Primate Species and Subspecies of the Taxonomic Suborders Prosimii and Anthropoidea. Journal of Virology, 77(22): 12310-12318. pdf
2003 Yoder, A.D. and J.J. Flynn. Origin of Malagasy Carnivora. In: The Natural History of Madagascar (S. M. Goodman and J. Benstead, eds.) University of Chicago Press, pp. 1253-1256.
2003 Yoder, A.D. Phylogeny of the lemurs. In: The Natural History of Madagascar (S. M. Goodman and J. Benstead, eds.) University of Chicago Press, pp. 1242-1247.
2003 Yang, Z. and A.D. Yoder. Comparison of likelihood and Bayesian methods for estimating divergence times using multiple gene loci and calibration points, with application to a radiation of cute-looking mouse lemur species. Systematic Biology, 52(5):705-716. pdf
2003 Yoder, A.D. The phylogenetic position of genus Tarsius: whose side are you on? In: Tarsiers: Past, Present, and Future (P.C. Wright, E.L. Simons and S. Gursky, eds.) Rutgers University Press, pp. 161-175.
2003 Eriksson, T., Hibbs, M.S., Yoder, A.D., Delwiche, C.F., and M.J. Donoghue. The phylogeny of Rosoideae (Rosaceae) based on sequences of the internal transcribed spacers (ITS) of nuclear ribosomal DNA and the trnL/F region of chloroplast DNA. International Journal of Plant Sciences, 164(2):197-211. pdf
2003 Yoder, A.D., Burns, M.M., Zehr, S., Delefosse, T., Veron, G., Goodman, S.M., and J.J. Flynn. Single origin of Malagasy Carnivora from an African ancestor. Nature, 421: 734-737. pdf
2002 Yoder, A.D., Burns, M.M., and F. Genin. Molecular evidence of reproductive isolation in sympatric sibling species of mouse lemurs. International Journal of Primatology, 23: 1335-1343. pdf
2002 Olson, L.E. and A.D. Yoder. Using secondary structure to identify ribosomal numts: cautionary examples from the human genome. Molecular Biology and Evolution, 19(1): 93-100. pdf
2002 Yoder, A.D. and T. Delefosse. Ancient DNA. McGraw-Hill, Yearbook of Science and Technology, pp. 9-14. pdf
2001 Yoder, A.D., Irwin, J.A., and B. Payseur. Failure of the ILD to determine data combinability for slow loris phylogeny. Systematic Biology, 50: 408-424. pdf
2001 Yoder, A.D. Ancient DNA from Megaladapis edwardsi. Folia Primatol (Basel), 72(6):342-344. pdf
2000 Yoder, A.D., Rasoloarison, R., Goodman, S., Irwin, J.A., Atsalis, S. Ravosa, M.J., and J.U. Ganzhorn. Remarkable species diversity in Malagasy mouse lemurs (Primates, Microcebus) Proceedings of the National Academy of Sciences, 97: 11325-11330. pdf
2000 Yoder, A.D., Irwin, J.A., Rakotoarisoa, S.V., and S. Goodman. Genetic tests of the taxonomic status of Lemur catta from the high mountain zone of the Andringtra Massif, Madagascar. Journal of Zoology, 252:1-9. pdf
2000 Yoder, A.D. and Z. Yang. Estimation of primate speciation dates using local molecular clocks. Molecular Biology and Evolution, 17(7):1081-1090. pdf
1999 Yoder, A.D. and J.A. Irwin. Phylogeny of the Lemuridae: effects of taxon and character sampling on resolution of species relationships within Eulemur. Cladistics, 15:351-361. pdf
1999 Yoder, A.D., Rakotosamimanana, B. and T.J. Parsons. Ancient DNA in subfossil lemurs: methodological challenges and their solutions. In: Rasaminanana, H., B. Rakotosamimanana, S. Goodman and J. Ganzhorn (eds.), New Directions in Lemur Studies. Plenum Press, pp. 1-17. pdf
1999 Yang, Z. and A.D. Yoder. Estimation of the transition/transversion rate bias and species sampling. Journal of Molecular Evolution, 48(3): 274-283. pdf |  dataset
1998 Yoder, A.D. Review of Introduction to the Primates, by Daris R. Swindler. American Zoologist, 39(1):186-187.
1997 Yoder, A.D. Back to the future: a synthesis of strepsirrhine systematics. Evolutionary Anthropology, 6(1):11-22.
1997 Yoder, A.D. An infinitude of connecting links. Trends in Ecology and Evolution, 12(3):86-88. pdf
1996 Yoder, A.D., Vilgalys, R., and M. Ruvolo. Molecular evolutionary dynamics of cytochrome b in strepsirrhine primates: the phylogenetic significance of third position transversions. Molecular Biology and Evolution, 13(10):1339-1350. pdf
1996 Yoder, A.D., Cartmill, M., Ruvolo, M., Smith, K., and R. Vilgalys. Ancient single origin for Malagasy primates. Proceedings of the National Academy of Sciences, 93:5122-5126. pdf
1996 Yoder, A.D. The use of phylogeny for reconstructing lemuriform biogeography. In: Biogeographie de Madagascar. (W.R. Lourenco, ed.) Editions de l’ORSTROM, Paris, pp. 245-258.
1994 Yoder, A.D. The relative position of the Cheirogaleidae in strepsirhine phylogeny: a comparison of morphological and molecular methods and results. American Journal of Physical Anthropology, 94(1):25-46.
1994 Cartmill, M. and A.D. Yoder. Molecules and Morphology in Primate Systematics: An Introduction. American Journal of Physical Anthropology, 94(1):1.
1994 G. Conroy, M. Cartmill and A.D. Yoder. Editors. Molecules and Morphology in Primate Systematics. New York: Wiley-Lyss; special volume of American Journal of Physical Anthropology, 94(1).
1993 Yoder, A.D. Review of Classification, Evolution, and the Nature of Biology, by Alec L. Panchen. American Journal of Physical Anthropology, 91(4):535-537.
1992 Yoder, A.D. Applications and limitations of ontogenetic comparisons for phylogeny reconstruction: the case of the strepsirhine internal carotid artery. Journal of Human Evolution, 23:183-195.
1992 Kay, R.F., Thewissen, J.G.M. and A.D. Yoder. Cranial anatomy of Ignacius graybullianus and the affinities of the Plesiadapiformes. American Journal of Physical Anthropology 89:477-498.
 
Last Updated: 16 February 2009