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Publications and Datasets
| 2009 |
Groeneveld, L.F., Weisrock, D.W., Rasoloarison, R., Yoder, A.D. and P.M. Kappeler. Species delimitation in lemurs: multiple genetic loci reveal low levels of species diversity in the genus Cheirogaleus. BMC Evolutionary Biology (in press).
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| 2009 |
O’Brien, J., Mariani, C., Olson, L.E., Russell, A.L., Say, L., Yoder, A.D. and T.J. Hayden. Multiple colonizations of the Western Indian Ocean by Pteropus fruit bats (Megachiroptera: Pteropodidae): the furthest islands were colonized first. Mol. Phyl. & Evol. (in press).
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| 2009 |
Karanth, K.P. and A.D. Yoder. Geographic origins of aDNA samples and prospects for aDNA studies in the tropics. In: Molecular Markers, PCR, Bioinformatics and Ancient DNA – Technology, Troubleshooting And Applications (G. Dorado, ed.) Science Publishers (in press).
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| 2009 |
Noonan, B.P. and A.D. Yoder. Anonymous nuclear markers for Malagasy plated lizards (Zonosaurus). Molecular Ecology Resources, 9:402-404.
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| 2009 |
Raselimanana, A., Noonan, B.P., Karanth, P., Gauthier, J., and A.D. Yoder. Phylogeny and Evolution of Malagasy Plated Lizards. Mol. Phyl. & Evol. 50: 336-344.
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| 2008 |
Riddle, BR; Dawson, MN; Hadly, EA, Hafner, D.J., Hickerson MJ, Mantooth SJ, and A.D. Yoder. The role of molecular genetics in sculpting the future of integrative biogeography. Progress in Physical Geography, 32 (2): 173-202.
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| 2008 |
Horvath, J., Weisrock, D., Embry, S.L., Fiorentino, Balhoff, J.P., I., Kappeler, P., Wray, G.A., Willard, H., and A.D. Yoder. The development and application of a phylogenomic toolkit: resolving the evolutionary history of Madagascar’s lemurs. Genome Research 18(3): 489-499.
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| 2008 |
Russell, A.L., Goodman, S.M., Fiorentino, I., and A.D. Yoder. Population genetic analysis of Myzopoda spp. (Chiroptera: Myzopodidae) in Madagascar. J. Mamm. 89 (1): 209-221.
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| 2007 |
Yoder, A.D. Lemurs: a Quick Guide. Current Biology, 17 (20): 866-868.
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| 2007 |
Heckman, K.L., Hanley, C.L., Rasoloarison, R. and A.D. Yoder. Multiple nuclear loci reveal patterns of incomplete lineage sorting and complex species history within western mouse lemurs (Microcebus). Mol. Phyl. & Evol. 43 (2): 353-367. .
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| 2007 |
Naghibalhossaini, F., Yoder, A.D., Tobi, M., and C.P. Stanners. Evolution of a tumorigenic property conferred by Glycophosphatidyl-inositol membrane anchors of CEA gene family members during the primate radiation. Molecular Biology of the Cell 18 (4): 1366-1374).
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| 2007 |
Russell, A.L., Ranivo, J., Palkovacs, E.P., Goodman, S.M., and A.D. Yoder. Working at the interface of phylogenetics and population genetics: a biogeographic analysis of Triaenops spp (Chiroptera: Hipposideridae) Molecular Ecology, 16:839-851.
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| 2006 |
Heckman, K. L., Rasoazanabary, E., Machlin, E., Godfrey, L.R., and A. D. Yoder. Incongruence between genetic and morphological diversity in Microcebus griseorufus of Beza Mahafaly. BMC Evolutionary Biology, 6:98 (16 Nov 2006).
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| 2006 |
Yoder, A.D. and M. Nowak. Has vicariance or dispersal been the predominant biogeographic force in Madagascar?: only time will tell. Ann. Rev. Ecol. Evol. Syst., 37:405-431.
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| 2006 |
Goodman, S.M., Cardiff, S. G., Ranivo, J., Russell, A.L. and A.D. Yoder. A new species of Emballonura (Emballonuridae: Chiroptera) from the dry regions of Madagascar. American .
Museum Novitates, No. 3538: 1-24.
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| 2006 |
Yoder, A.D. and K. Heckman. Mouse lemur phylogeography revises a model of ecogeographic constraint in Madagascar. In: Primate Biogeography: Progress and Prospects (J. Fleagle and S.M. Lehman, eds.) Kluwer Press, pp. 255 – 268.
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| 2005 |
Yoder, A.D. The biogeography of Madagascar: where to turn when the fossils aren’t there. Paleontological Society Papers, V. 11, 129-139.
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| 2005 |
Tan, Y., Yoder, A.D., Yamashita, N. and W.-H. Li. Evidence from opsin genes rejects nocturnality in ancestral primates. Proceedings of the National Academy of Sciences 102: 14712-14716.
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| 2005 |
Yoder, A.D., Olson, L.E., Hanley, C., Heckman, K., Rasoloarison, R., Russell, A.L., Ranivo, J., Soarimalala, V., Karanth, K.P., Raselimanana, A.P. and S.M. Goodman. A multidimensional approach for detecting species patterns in Malagasy vertebrates. Proceedings of the National Academy of Sciences 102: 6587-6594, Suppl. 1 (invited Colloquium contribution).
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| 2005 |
Karanth, P. Rakotosamimanana, B., Parsons, T.J. and A.D. Yoder. Ancient DNA from giant extinct lemurs verifies single origin of Malagasy primates. Proceedings of the National Academy of Sciences 102: 5090-5095.
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| 2005 |
Karanth, K.P., Palkovacs, E., Gerlach, J., Glaberman, S., Caccone, A., and A.D. Yoder. Native Seychelles tortoises or Aldabran imports? The importance of radiocarbon dating for ancient DNA studies. Amphibia-Reptilia 26(1): 116-121.
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| 2004 |
Olson, L.E., Goodman, S., and A.D. Yoder. Illumination of cryptic species boundaries in long-tailed shrew tenrecs (Mammalia: Tenrecidae; Microgale) provides insights into geographic variation and distributional constraints. Biological Journal of the Linnean Society, 83:1-22.
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| 2004 |
Yoder, A.D. and Z. Yang. Divergence dates for Malagasy lemurs estimated from multiple gene loci: geological and evolutionary context. Molecular Ecology, 13:757-773.
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| 2004 |
Yoder, A.D. Review of A Primer of Conservation Genetics, by Frankahm, R., Ballou, J.D. and D.A. Briscoe. Journal of Mammalogy (info).
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| 2003 |
Kunstman, K., Puffer, B., Korber, B., Kuiken, C., Smith, U., Kunstman, J., Stanton, J., Agy, M., Shibata, R., Yoder, A.D., Pillai, S., Doms, R., Marx, P., and S. Wolinsky. Structure and Function of CC-Chemokine Receptor 5 Homologues Derived from Representative Primate Species and Subspecies of the Taxonomic Suborders Prosimii and Anthropoidea. Journal of Virology, 77(22): 12310-12318.
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| 2003 |
Yoder, A.D. and J.J. Flynn. Origin of Malagasy Carnivora. In: The Natural History of Madagascar (S. M. Goodman and J. Benstead, eds.) University of Chicago Press, pp. 1253-1256.
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| 2003 |
Yoder, A.D. Phylogeny of the lemurs. In: The Natural History of Madagascar (S. M. Goodman and J. Benstead, eds.) University of Chicago Press, pp. 1242-1247.
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| 2003 |
Yang, Z. and A.D. Yoder. Comparison of likelihood and Bayesian methods for estimating divergence times using multiple gene loci and calibration points, with application to a radiation of cute-looking mouse lemur species. Systematic Biology, 52(5):705-716.
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| 2003 |
Yoder, A.D. The phylogenetic position of genus Tarsius: whose side are you on? In: Tarsiers: Past, Present, and Future (P.C. Wright, E.L. Simons and S. Gursky, eds.) Rutgers University Press, pp. 161-175.
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| 2003 |
Eriksson, T., Hibbs, M.S., Yoder, A.D., Delwiche, C.F., and M.J. Donoghue. The phylogeny of Rosoideae (Rosaceae) based on sequences of the internal transcribed spacers (ITS) of nuclear ribosomal DNA and the trnL/F region of chloroplast DNA. International Journal of Plant Sciences, 164(2):197-211.
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| 2003 |
Yoder, A.D., Burns, M.M., Zehr, S., Delefosse, T., Veron, G., Goodman, S.M., and J.J. Flynn. Single origin of Malagasy Carnivora from an African ancestor. Nature, 421: 734-737.
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| 2002 |
Yoder, A.D., Burns, M.M., and F. Genin. Molecular evidence of reproductive isolation in sympatric sibling species of mouse lemurs. International Journal of Primatology, 23: 1335-1343.
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| 2002 |
Olson, L.E. and A.D. Yoder. Using secondary structure to identify ribosomal numts: cautionary examples from the human genome. Molecular Biology and Evolution, 19(1): 93-100.
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| 2002 |
Yoder, A.D. and T. Delefosse. Ancient DNA. McGraw-Hill, Yearbook of Science and Technology, pp. 9-14.
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| 2001 |
Yoder, A.D., Irwin, J.A., and B. Payseur. Failure of the ILD to determine data combinability for slow loris phylogeny. Systematic Biology, 50: 408-424.
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| 2001 |
Yoder, A.D. Ancient DNA from Megaladapis edwardsi. Folia Primatol (Basel), 72(6):342-344.
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| 2000 |
Yoder, A.D., Rasoloarison, R., Goodman, S., Irwin, J.A., Atsalis, S. Ravosa, M.J., and J.U. Ganzhorn. Remarkable species diversity in Malagasy mouse lemurs (Primates, Microcebus) Proceedings of the National Academy of Sciences, 97: 11325-11330.
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| 2000 |
Yoder, A.D., Irwin, J.A., Rakotoarisoa, S.V., and S. Goodman. Genetic tests of the taxonomic status of Lemur catta from the high mountain zone of the Andringtra Massif, Madagascar. Journal of Zoology, 252:1-9.
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| 2000 |
Yoder, A.D. and Z. Yang. Estimation of primate speciation dates using local molecular clocks. Molecular Biology and Evolution, 17(7):1081-1090.
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| 1999 |
Yoder, A.D. and J.A. Irwin. Phylogeny of the Lemuridae: effects of taxon and character sampling on resolution of species relationships within Eulemur. Cladistics, 15:351-361.
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| 1999 |
Yoder, A.D., Rakotosamimanana, B. and T.J. Parsons. Ancient DNA in subfossil lemurs: methodological challenges and their solutions. In: Rasaminanana, H., B. Rakotosamimanana, S. Goodman and J. Ganzhorn (eds.), New Directions in Lemur Studies. Plenum Press, pp. 1-17.
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| 1999 |
Yang, Z. and A.D. Yoder. Estimation of the transition/transversion rate bias and species sampling. Journal of Molecular Evolution, 48(3): 274-283.
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| 1998 |
Yoder, A.D. Review of Introduction to the Primates, by Daris R. Swindler. American Zoologist, 39(1):186-187.
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| 1997 |
Yoder, A.D. Back to the future: a synthesis of strepsirrhine systematics. Evolutionary Anthropology, 6(1):11-22.
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| 1997 |
Yoder, A.D. An infinitude of connecting links. Trends in Ecology and Evolution, 12(3):86-88.
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| 1996 |
Yoder, A.D., Vilgalys, R., and M. Ruvolo. Molecular evolutionary dynamics of cytochrome b in strepsirrhine primates: the phylogenetic significance of third position transversions. Molecular Biology and Evolution, 13(10):1339-1350.
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| 1996 |
Yoder, A.D., Cartmill, M., Ruvolo, M., Smith, K., and R. Vilgalys. Ancient single origin for Malagasy primates. Proceedings of the National Academy of Sciences, 93:5122-5126.
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| 1996 |
Yoder, A.D. The use of phylogeny for reconstructing lemuriform biogeography. In: Biogeographie de Madagascar. (W.R. Lourenco, ed.) Editions de l’ORSTROM, Paris, pp. 245-258.
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| 1994 |
Yoder, A.D. The relative position of the Cheirogaleidae in strepsirhine phylogeny: a comparison of morphological and molecular methods and results. American Journal of Physical Anthropology, 94(1):25-46.
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| 1994 |
Cartmill, M. and A.D. Yoder. Molecules and Morphology in Primate Systematics: An Introduction. American Journal of Physical Anthropology, 94(1):1.
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| 1994 |
G. Conroy, M. Cartmill and A.D. Yoder. Editors. Molecules and Morphology in Primate Systematics. New York: Wiley-Lyss; special volume of American Journal of Physical Anthropology, 94(1).
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| 1993 |
Yoder, A.D. Review of Classification, Evolution, and the Nature of Biology, by Alec L. Panchen. American Journal of Physical Anthropology, 91(4):535-537.
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| 1992 |
Yoder, A.D. Applications and limitations of ontogenetic comparisons for phylogeny reconstruction: the case of the strepsirhine internal carotid artery. Journal of Human Evolution, 23:183-195.
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| 1992 |
Kay, R.F., Thewissen, J.G.M. and A.D. Yoder. Cranial anatomy of Ignacius graybullianus and the affinities of the Plesiadapiformes. American Journal of Physical Anthropology 89:477-498.
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